Please use this identifier to cite or link to this item: http://hdl.handle.net/11452/28501
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dc.contributor.authorAdıgüzel, Zelal-
dc.contributor.authorTarık, Ahmet Baykal-
dc.contributor.authorKaçar, Ömer-
dc.contributor.authorAçılan, Ceyda-
dc.date.accessioned2022-09-06T12:31:19Z-
dc.date.available2022-09-06T12:31:19Z-
dc.date.issued2014-11-
dc.identifier.citationAdıgüzel, Z. vd. (2014). "Biochemical and proteomic analysis of a potential anticancer agent: Palladium(II) saccharinate complex of terpyridine acting through double strand break formation". Journal of Proteome Research, 13(11), 5240-5249.en_US
dc.identifier.issn1535-3893-
dc.identifier.issn1535-3907-
dc.identifier.urihttps://doi.org/10.1021/pr5006718-
dc.identifier.urihttps://pubs.acs.org/doi/10.1021/pr5006718-
dc.identifier.urihttp://hdl.handle.net/11452/28501-
dc.description.abstractMetal based chemotherapeutic drugs are widely used as an effective method to defeat various cancers. In this study, the mechanism of action of a novel therapeutic agent, [Pd(sac)(terpy)](sac)center dot 4H(2)O (sac = saccharinate, and terpy = 2,2':6',2 ''-terpyridine) was studied. To better understand the proteomic changes in response to this agent, we performed nano LC-MS/MS analyses in human breast cancer cells (MDA-MB-231). Thirty proteins were identified to be differentially expressed more than 40% after drug treatment. Many cellular pathways were affected, including proteins involved in DNA repair, apoptosis, energy metabolism, protein folding, cytoskeleton, pre-mRNA maturation, or protein translation. The changes in protein expression were further verified for XRCC5, which plays a role in double strand break (DSB) repair, and ubiquitin, which is involved in protein degradation and apoptosis. The elevated XRCC5 levels were suggestive of increased DSBs. The presence of DSBs was confirmed by smearing of plasmid DNA in vitro and induction of gamma H2AX foci in vivo. There was also increased intracellular reactive oxygen species (ROS) formation, as detected by 2',7'-dichlorofluorescein diacetate (DCFDA) staining. Scavenging ROS by N-acetylcysteine rescued cell death in response to Pd(II) treatment, potentially explaining how the Pd(II) complex damaged the DNA. The details of this analysis and the significance will be discussed during the scope of this work.en_US
dc.language.isoenen_US
dc.publisherAmer Chemicalen_US
dc.rightsinfo:eu-repo/semantics/closedAccessen_US
dc.subjectPalladium(II) saccharinate complex with terpyridineen_US
dc.subjectAnticancer drugsen_US
dc.subjectDNA double strand breaksen_US
dc.subjectReactive oxygen speciesen_US
dc.subjectNonhomologous end joiningen_US
dc.subjectApoptosisen_US
dc.subjectProteomicsen_US
dc.subjectCancer-cellsen_US
dc.subjectStatistical-modelen_US
dc.subjectPlatinum(II)en_US
dc.subjectProteinsen_US
dc.subjectBiochemistry & molecular biologyen_US
dc.subject.meshAntineoplastic agentsen_US
dc.subject.meshBreast neoplasmsen_US
dc.subject.meshCell line, tumoren_US
dc.subject.meshCoordination complexesen_US
dc.subject.meshDNA breaks, double-strandeden_US
dc.subject.meshDNA helicasesen_US
dc.subject.meshFemaleen_US
dc.subject.meshHeLa cellsen_US
dc.subject.meshHumansen_US
dc.subject.meshPalladiumen_US
dc.subject.meshProteomicsen_US
dc.subject.meshReactive oxygen speciesen_US
dc.subject.meshTandem mass spectrometryen_US
dc.titleBiochemical and proteomic analysis of a potential anticancer agent: Palladium(II) saccharinate complex of terpyridine acting through double strand break formationen_US
dc.typeArticleen_US
dc.identifier.wos000344636500065tr_TR
dc.identifier.scopus2-s2.0-84908868909tr_TR
dc.relation.publicationcategoryMakale - Uluslararası Hakemli Dergitr_TR
dc.contributor.departmentUludağ Üniversitesi/Fen-Edebiyat Fakültesi/Kimya Bölümü.tr_TR
dc.contributor.departmentUludağ Üniversitesi/Tıp Fakültesi/Tıbbi Biyokimya Anabilim Dalı.tr_TR
dc.contributor.orcid0000-0002-2849-3332tr_TR
dc.identifier.startpage5240tr_TR
dc.identifier.endpage5249tr_TR
dc.identifier.volume13tr_TR
dc.identifier.issue11tr_TR
dc.relation.journalJournal of Proteome Researchen_US
dc.contributor.buuauthorYılmaz, Veysel Turan-
dc.contributor.buuauthorUlukaya, Engin-
dc.contributor.researcheridK-5792-2018tr_TR
dc.contributor.researcheridL-7238-2018tr_TR
dc.relation.collaborationYurt içitr_TR
dc.relation.collaborationSanayitr_TR
dc.identifier.pubmed25210790tr_TR
dc.subject.wosBiochemical research methodsen_US
dc.indexed.wosSCIEen_US
dc.indexed.scopusScopusen_US
dc.indexed.pubmedPubMeden_US
dc.wos.quartileQ1en_US
dc.contributor.scopusid7006269202tr_TR
dc.contributor.scopusid6602927353tr_TR
dc.subject.scopusComplex; Palladium; 2-Phenylpyridineen_US
dc.subject.emtreeAcetylcysteineen_US
dc.subject.emtreeAntineoplastic agenten_US
dc.subject.emtreeCisplatinen_US
dc.subject.emtreeHistone H2AXen_US
dc.subject.emtreeMessenger RNA precursoren_US
dc.subject.emtreePalladium complexen_US
dc.subject.emtreePalladium saccharinateen_US
dc.subject.emtreePlasmid DNAen_US
dc.subject.emtreeReactive oxygen metaboliteen_US
dc.subject.emtreeSaccharin sodiumen_US
dc.subject.emtreeUbiquitin Cen_US
dc.subject.emtreeUnclassified drugen_US
dc.subject.emtreeXRCC5 proteinen_US
dc.subject.emtreeAntineoplastic agenten_US
dc.subject.emtreeCoordination compounden_US
dc.subject.emtreeDNA helicaseen_US
dc.subject.emtreePalladiumen_US
dc.subject.emtreeReactive oxygen metaboliteen_US
dc.subject.emtreeSaccharinate(2,2'-6',2'-terpyridine)palladium(II)en_US
dc.subject.emtreeXRCC5 proteinen_US
dc.subject.emtreeHumanen_US
dc.subject.emtreeApoptosisen_US
dc.subject.emtreeArticleen_US
dc.subject.emtreeBiochemistryen_US
dc.subject.emtreeBreast cancer cell lineen_US
dc.subject.emtreeCell deathen_US
dc.subject.emtreeCell viabilityen_US
dc.subject.emtreeControlled studyen_US
dc.subject.emtreeCytoskeletonen_US
dc.subject.emtreeDNA repairen_US
dc.subject.emtreeDouble stranded DNA breaken_US
dc.subject.emtreeDrug mechanismen_US
dc.subject.emtreeEnergy metabolismen_US
dc.subject.emtreeHumanen_US
dc.subject.emtreeIn vitro studyen_US
dc.subject.emtreeIn vivo studyen_US
dc.subject.emtreeLiquid chromatographyen_US
dc.subject.emtreeNucleotide sequenceen_US
dc.subject.emtreeOxidative stressen_US
dc.subject.emtreeProtein analysisen_US
dc.subject.emtreeProtein degradationen_US
dc.subject.emtreeProtein expressionen_US
dc.subject.emtreeProtein foldingen_US
dc.subject.emtreeProteomicsen_US
dc.subject.emtreeTandem mass spectrometryen_US
dc.subject.emtreeBreast neoplasmsen_US
dc.subject.emtreeChemistryen_US
dc.subject.emtreeDouble stranded DNA breaken_US
dc.subject.emtreeDrug effectsen_US
dc.subject.emtreeFemaleen_US
dc.subject.emtreeHeLa cell lineen_US
dc.subject.emtreeMetabolismen_US
dc.subject.emtreePathologyen_US
dc.subject.emtreeProceduresen_US
dc.subject.emtreeProteomicsen_US
dc.subject.emtreeTumor cell lineen_US
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