Please use this identifier to cite or link to this item: http://hdl.handle.net/11452/30150
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dc.contributor.authorSatıcıoğlu, İzzet Burçin-
dc.contributor.authorJanda, J. Michael-
dc.date.accessioned2022-12-28T13:27:59Z-
dc.date.available2022-12-28T13:27:59Z-
dc.date.issued2018-09-21-
dc.identifier.citationDuman, M. vd. (2018). ''The determination of the infectious status and prevalence of motile Aeromonas species isolated from disease cases in rainbow trout (Oncorhynchus mykiss) and aquarium fish''. Journal of Fish Diseases, 41(12), 1843-1857.en_US
dc.identifier.issn0140-7775-
dc.identifier.issn1365-2761-
dc.identifier.urihttps://doi.org/10.1111/jfd.12896-
dc.identifier.urionlinelibrary.wiley.com/doi/10.1111/jfd.12896-
dc.identifier.urihttp://hdl.handle.net/11452/30150-
dc.description.abstractThe aims of this study were to determine the prevalence and phylogenetic relationship of motile Aeromonas spp. that might be pathogenic species for rainbow trout in infected/mix infection cases (based upon different outbreaks on fish farms). A total of 99 motile Aeromonas isolates (and three reference strains) were analysed that were isolated from four different fish species in different sizes of fish (0.1-3,000 g), different months and water temperatures (6.1-21.2 degrees C). The biochemical characteristics of the isolates were determined using conventional tests and a rapid test kit. Additionally, molecular identification was performed using the gyrB housekeeping gene region and with glycerophospholipid-cholesterol acyltransferase polymerase chain reaction (GCAT-PCR). The sequencing results obtained from the gyrB gene region were deposited in the GenBank database, and phylogenetic relationships were determined with the BioNumerics 7.6 database. Nearly half of the Aeromonas isolates that were isolated from rainbow trout showing signs of disease were determined to be possible infectious agents. Aeromonas species exhibit biochemical variability for many characters, so some Aeromonas species tested negative for GCAT-PCR despite that this test was created especially for Aeromonas identification. The phylogenetic tree based upon gyrB contained 10 different phylogroups that were based on 96% cut-off value in gyrB gene region.en_US
dc.description.sponsorshipMinistry of Food, Aqriculture and Animal Husbandry (TAGEM/14/AR-GE/26)en_US
dc.language.isoenen_US
dc.publisherBlackwell Publishingen_US
dc.rightsinfo:eu-repo/semantics/closedAccessen_US
dc.subjectFisheriesen_US
dc.subjectMarine & freshwater biologyen_US
dc.subjectVeterinary sciencesen_US
dc.subjectGCAT-PCRen_US
dc.subjectMotile aeromonas septicemiaen_US
dc.subjectPathogenic aeromonasen_US
dc.subjectPhylogenetic treeen_US
dc.subjectRibosomal-RNA geneen_US
dc.subjectAntibiotic-resistanceen_US
dc.subjectPhylogenetic analysisen_US
dc.subjectVirulence genesen_US
dc.subjectIdentificationen_US
dc.subjectGyrben_US
dc.subjectWateren_US
dc.subjectPathogencityen_US
dc.subjectHydrophilaen_US
dc.subjectSPPen_US
dc.subject.meshAcyltransferasesen_US
dc.subject.meshAeromonasen_US
dc.subject.meshAnimalsen_US
dc.subject.meshBacterial proteinsen_US
dc.subject.meshCoinfectionen_US
dc.subject.meshDNA gyraseen_US
dc.subject.meshFish diseasesen_US
dc.subject.meshGram-negative bacterial infectionsen_US
dc.subject.meshOncorhynchus mykissen_US
dc.subject.meshOpportunistic infectionsen_US
dc.subject.meshPhylogenyen_US
dc.subject.meshPolymerase chain reactionen_US
dc.subject.meshPrevalenceen_US
dc.subject.meshTurkeyen_US
dc.titleThe determination of the infectious status and prevalence of motile Aeromonas species isolated from disease cases in rainbow trout (Oncorhynchus mykiss) and aquarium fishen_US
dc.typeArticleen_US
dc.identifier.wos000449651200008tr_TR
dc.identifier.scopus2-s2.0-85053677615tr_TR
dc.relation.publicationcategoryMakale - Uluslararası Hakemli Dergitr_TR
dc.contributor.departmentUludağ Üniversitesi/Veterinerlik Fakültesi/Su Hayvanları Hastalıkları Bölümü.tr_TR
dc.relation.bapKUAP (V)-2014/7tr_TR
dc.contributor.orcid0000-0001-7707-2705tr_TR
dc.contributor.orcid0000-0001-9096-875Xtr_TR
dc.identifier.startpage1843tr_TR
dc.identifier.endpage1857tr_TR
dc.identifier.volume41tr_TR
dc.identifier.issue12tr_TR
dc.relation.journalJournal of Fish Diseasesen_US
dc.contributor.buuauthorDuman, Muhammed-
dc.contributor.buuauthorAltun, Soner-
dc.contributor.researcheridT-1697-2019tr_TR
dc.contributor.researcheridAAG-8518-2021tr_TR
dc.relation.collaborationYurt içitr_TR
dc.relation.collaborationSanayitr_TR
dc.identifier.pubmed30239011tr_TR
dc.subject.wosFisheriesen_US
dc.subject.wosMarine & freshwater biologyen_US
dc.subject.wosVeterinary sciencesen_US
dc.indexed.wosSCIEen_US
dc.indexed.scopusScopusen_US
dc.indexed.pubmedPubMeden_US
dc.wos.quartileQ1 (Veterinary sciences)en_US
dc.wos.quartileQ2en_US
dc.contributor.scopusid55568071100tr_TR
dc.contributor.scopusid56269221600tr_TR
dc.subject.scopusAeromonas; Aeromonas Hydrophila; Virulenceen_US
dc.subject.emtreeAdenineen_US
dc.subject.emtreeAdipic aciden_US
dc.subject.emtreeCholesterol acyltransferaseen_US
dc.subject.emtreeCytosineen_US
dc.subject.emtreeDNA topoisomerase (ATP hydrolysing) Ben_US
dc.subject.emtreeGlycerophospholipiden_US
dc.subject.emtreeGuanineen_US
dc.subject.emtreePhenylacetic aciden_US
dc.subject.emtreeRNA 16Sen_US
dc.subject.emtreeThymineen_US
dc.subject.emtreeAcyltransferaseen_US
dc.subject.emtreeActerial proteinen_US
dc.subject.emtreeDNA topoisomerase (ATP hydrolysing)en_US
dc.subject.emtreeGlycerophospholipid-cholesterol acyltransferaseen_US
dc.subject.emtreeAeromonasen_US
dc.subject.emtreeAeromonas bestiarumen_US
dc.subject.emtreeAeromonas caviaeen_US
dc.subject.emtreeAeromonas dhakensisen_US
dc.subject.emtreeAeromonas encheleiaen_US
dc.subject.emtreeAeromonas hydrophilaen_US
dc.subject.emtreeAeromonas mediaen_US
dc.subject.emtreeAeromonas molluscorumen_US
dc.subject.emtreeAeromonas salmonicidaen_US
dc.subject.emtreeAeromonas veroniien_US
dc.subject.emtreeAnimal tissueen_US
dc.subject.emtreeAquacultureen_US
dc.subject.emtreeArticleen_US
dc.subject.emtreeBacterial strainen_US
dc.subject.emtreeBacterium identificationen_US
dc.subject.emtreeBacterium isolateen_US
dc.subject.emtreeBacterium isolationen_US
dc.subject.emtreeBiochemical analysisen_US
dc.subject.emtreeBlack Seaen_US
dc.subject.emtreeCitrobacteren_US
dc.subject.emtreeCitrobacter gillenii infectionen_US
dc.subject.emtreeControlled studyen_US
dc.subject.emtreeData analysis softwareen_US
dc.subject.emtreeEnteric redmouth diseaseen_US
dc.subject.emtreeEnterobacter cloacaeen_US
dc.subject.emtreeEnterobacter cloacae infectionen_US
dc.subject.emtreeFlavobacterium psychrophilum infectionen_US
dc.subject.emtreeGene sequenceen_US
dc.subject.emtreeGoldfishen_US
dc.subject.emtreeGram negative infectionen_US
dc.subject.emtreeHousekeeping geneen_US
dc.subject.emtreeInfectious pancreatic necrosisen_US
dc.subject.emtreeLactococcus garvieaeen_US
dc.subject.emtreeLactococcus garvieae infectionen_US
dc.subject.emtreeMaximum likelihood methoden_US
dc.subject.emtreeMixed infectionen_US
dc.subject.emtreeMolecular diagnosisen_US
dc.subject.emtreeMorganellaen_US
dc.subject.emtreeMorganella psychrotolerans infectionen_US
dc.subject.emtreeNonhumanen_US
dc.subject.emtreeOncorhynchus mykissen_US
dc.subject.emtreePhylogenetic treeen_US
dc.subject.emtreePhylogenyen_US
dc.subject.emtreePolymerase chain reactionen_US
dc.subject.emtreePrevalenceen_US
dc.subject.emtreeSalmo truttaen_US
dc.subject.emtreeWater temperatureen_US
dc.subject.emtreeZebra fishen_US
dc.subject.emtreeAeromonasen_US
dc.subject.emtreeAnimalen_US
dc.subject.emtreeClassificationen_US
dc.subject.emtreeFish diseaseen_US
dc.subject.emtreeGeneticsen_US
dc.subject.emtreeGram negative infectionen_US
dc.subject.emtreeMicrobiologyen_US
dc.subject.emtreeMixed infectionen_US
dc.subject.emtreeOpportunistic infectionen_US
dc.subject.emtreePhysiologyen_US
dc.subject.emtreePrevalenceen_US
dc.subject.emtreeTurkey (bird)en_US
dc.subject.emtreeVeterinary medicineen_US
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