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http://hdl.handle.net/11452/31747
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DC Field | Value | Language |
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dc.contributor.author | Yilmaz, Mete | - |
dc.contributor.author | Foss, Amanda J. | - |
dc.contributor.author | Miles, Christopher O. | - |
dc.contributor.author | Demir, Nilsun | - |
dc.contributor.author | Balcı, Muharrem | - |
dc.contributor.author | Beach, Daniel G. | - |
dc.date.accessioned | 2023-03-27T06:16:16Z | - |
dc.date.available | 2023-03-27T06:16:16Z | - |
dc.date.issued | 2019-06-03 | - |
dc.identifier.citation | Yılmaz, M. vd. (2019). ''Comprehensive multi-technique approach reveals the high diversity of microcystins in field collections and an associated isolate of Microcystis aeruginosa from a Turkish lake''. Toxicon, 167, 87-100. | en_US |
dc.identifier.issn | 0041-0101 | - |
dc.identifier.issn | 1879-3150 | - |
dc.identifier.uri | https://doi.org/10.1016/j.toxicon.2019.06.006 | - |
dc.identifier.uri | https://www.sciencedirect.com/science/article/pii/S0041010119301795 | - |
dc.identifier.uri | http://hdl.handle.net/11452/31747 | - |
dc.description.abstract | Microcystins (MCs) are hepatotoxic and potentially carcinogenic cyanotoxins. They exhibit high structural variability, with nearly 250 variants described to date. This variability can result in incomplete detection of MC variants during lake surveys due to the frequent use of targeted analytical methods and a lack of standards available for identification and quantitation. In this study, Lake Uluabat in Turkey was sampled during the summer of 2015. Phylogenetic analysis of the environmental mcyA sequences suggested Microcystis spp. were the major MC contributors. A combination of liquid chromatography-tandem mass spectrometry (LC-MS/MS), liquid chromatography with UV detection and mass spectrometry (LC-UV-MS), and a novel liquid chromatography-high resolution mass spectrometry (LC-HRMS) method, together with thiol and periodate reactivity, revealed more than 36 MC variants in the lake samples and a strain of M. aeruginosa (AQUAMEB-24) isolated from Lake Uluabat. Only MCs containing arginine at position-4 were detected in the culture, while MC-LA, -LY, -LW and -LF were also detected in the lake samples, suggesting the presence of other MC producers in the lake. The previously unreported MCs MC-(H2)YR (dihydrotyrosine at position-2) (17), [epoxyAdda(5)]MC-LR, [DMAdda(5)]MC-RR (1) and [Mser(7)]MC-RR (8) were detected in the culture and/or field samples. This study is a good example of how commonly used targeted LC-MS methods can underestimate the diversity of MCs in freshwater lakes and cyanobacteria cultures and how untargeted LC-MS methods can be used to comprehensively assess MC diversity present in a new system. | en_US |
dc.language.iso | en | en_US |
dc.publisher | Pergamon-Elsevier Science | en_US |
dc.rights | info:eu-repo/semantics/closedAccess | en_US |
dc.subject | Pharmacology & pharmacy | en_US |
dc.subject | Toxicology | en_US |
dc.subject | [DMAdda(5)] MC-RR | en_US |
dc.subject | Lake Uluabat | en_US |
dc.subject | MC-(H2)YR | en_US |
dc.subject | [Mser(7)]MC-RR | en_US |
dc.subject | Microcystin | en_US |
dc.subject | Untargeted lc-hams | en_US |
dc.subject | Cyanobacterial genus anabaena | en_US |
dc.subject | Lc-ms analysis | en_US |
dc.subject | Fresh-water | en_US |
dc.subject | Subg. dolichospermum | en_US |
dc.subject | Thiol derivatization | en_US |
dc.subject | Toxic cyanobacterium | en_US |
dc.subject | Species composition | en_US |
dc.subject | Genetic diversity | en_US |
dc.subject | Biosynthesis | en_US |
dc.subject | Planktothrix | en_US |
dc.subject.mesh | Chromatography, liquid | en_US |
dc.subject.mesh | Cyanobacteria | en_US |
dc.subject.mesh | Environmental monitoring | en_US |
dc.subject.mesh | Enzyme-linked immunosorbent assay | en_US |
dc.subject.mesh | Lakes | en_US |
dc.subject.mesh | Microcystins | en_US |
dc.subject.mesh | Phylogeny | en_US |
dc.subject.mesh | Tandem mass spectrometry | en_US |
dc.subject.mesh | Turkey | en_US |
dc.title | Comprehensive multi-technique approach reveals the high diversity of microcystins in field collections and an associated isolate of Microcystis aeruginosa from a Turkish lake | en_US |
dc.type | Article | en_US |
dc.identifier.wos | 000482248000012 | tr_TR |
dc.identifier.scopus | 2-s2.0-85067670141 | tr_TR |
dc.relation.tubitak | 114Y641 | tr_TR |
dc.relation.publicationcategory | Makale - Uluslararası Hakemli Dergi | tr_TR |
dc.contributor.department | Bursa Uludağ Üniversitesi/Fen-Edebiyat Fakültesi/Biyoloji Bölümü. | tr_TR |
dc.contributor.orcid | 0000-0002-3895-7655 | tr_TR |
dc.identifier.startpage | 87 | tr_TR |
dc.identifier.endpage | 100 | tr_TR |
dc.identifier.volume | 167 | tr_TR |
dc.relation.journal | Toxicon | en_US |
dc.contributor.buuauthor | Özen, Mihriban | - |
dc.contributor.researcherid | H-7762-2012 | tr_TR |
dc.relation.collaboration | Yurt dışı | tr_TR |
dc.relation.collaboration | Sanayi | tr_TR |
dc.relation.collaboration | Yurt içi | tr_TR |
dc.identifier.pubmed | 31181296 | tr_TR |
dc.subject.wos | Pharmacology & pharmacy | en_US |
dc.subject.wos | Toxicology | en_US |
dc.indexed.wos | SCIE | en_US |
dc.indexed.scopus | Scopus | en_US |
dc.indexed.pubmed | PubMed | en_US |
dc.wos.quartile | Q3 | en_US |
dc.contributor.scopusid | 7006874012 | tr_TR |
dc.subject.scopus | Microcystin; Algal Bloom; Cyanobacteria | en_US |
dc.subject.emtree | Microcystin | en_US |
dc.subject.emtree | Microcystin LA | en_US |
dc.subject.emtree | Microcystin LF | en_US |
dc.subject.emtree | Microcystin LY | en_US |
dc.subject.emtree | Microcystin LW | en_US |
dc.subject.emtree | Periodate | en_US |
dc.subject.emtree | Thiol | en_US |
dc.subject.emtree | Unclassified drug | en_US |
dc.subject.emtree | Microcystin | en_US |
dc.subject.emtree | Article | en_US |
dc.subject.emtree | Bacterial strain | en_US |
dc.subject.emtree | Bacterium culture | en_US |
dc.subject.emtree | Bacterium isolate | en_US |
dc.subject.emtree | Controlled study | en_US |
dc.subject.emtree | Enzyme linked immunosorbent assay | en_US |
dc.subject.emtree | Freshwater environment | en_US |
dc.subject.emtree | Gene | en_US |
dc.subject.emtree | Lake | en_US |
dc.subject.emtree | Liquid chromatography-mass spectrometry | en_US |
dc.subject.emtree | McyA gene | en_US |
dc.subject.emtree | Microcystis aeruginosa | en_US |
dc.subject.emtree | Nonhuman | en_US |
dc.subject.emtree | Phylogeny | en_US |
dc.subject.emtree | Priority journal | en_US |
dc.subject.emtree | Sequence analysis | en_US |
dc.subject.emtree | Summer | en_US |
dc.subject.emtree | Toxin analysis | en_US |
dc.subject.emtree | Toxin synthesis | en_US |
dc.subject.emtree | Turkey (republic) | en_US |
dc.subject.emtree | Ultraviolet spectroscopy | en_US |
dc.subject.emtree | Chemistry | en_US |
dc.subject.emtree | Cyanobacterium | en_US |
dc.subject.emtree | Environmental monitoring | en_US |
dc.subject.emtree | Genetics | en_US |
dc.subject.emtree | Liquid chromatography | en_US |
dc.subject.emtree | Tandem mass spectrometry | en_US |
dc.subject.emtree | Turkey (bird) | en_US |
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