Please use this identifier to cite or link to this item: http://hdl.handle.net/11452/34328
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dc.contributor.authorSatıcıoğlu, İzzet Burçin-
dc.date.accessioned2023-10-12T11:41:03Z-
dc.date.available2023-10-12T11:41:03Z-
dc.date.issued2020-
dc.identifier.citationDuman, M. vd. (2020). "Epidemiology, genotypic diversity, and antimicrobial resistance of Lactococcus garvieae in farmed rainbow trout (Oncorhynchus mykiss)". Iranian Journal of Fisheries Sciences, 19(1), 1-18en_US
dc.identifier.issn1562-2916-
dc.identifier.urihttps://doi.org/10.22092/ijfs.2018.117609-
dc.identifier.urihttps://jifro.areeo.ac.ir/article_117609.html-
dc.identifier.urihttp://hdl.handle.net/11452/34328-
dc.description.abstractBacterial agents must be genotypically analyzed for vaccinations, effective control programs, and antimicrobial resistance genes that could transfer from aquaculture settings to terrestrial ecosystems and humans. Therefore, we investigated the prevalence, genotypic characterization, and antimicrobial resistance of Lactococcus garvieae for two years at aquaculture sites throughout Turkey. A total of 137 L. garvieae isolates were obtained from rainbow trout (Oncorhynchus mykiss) farms in different regions of Turkey, and three reference strains were used. The isolates were confirmed genotypically using species specific primer sets. All isolates were genotyped with RAPD-PCR using M13 primers. Five different genogroups were determined, and the reference strains were found to differ from all the isolates. Some isolates were compared with the GeneBank database and most isolates were within the same European, Asian, Australian, and South African genogroups. Isolates showed differing levels of resistance to most of the commonly used antimicrobials. The ermB, ermA, tetM, and tetS genes were identified and confirmed, whereas the floR, sulI, sulII, sulIII, tetA, tetB, and tetE genes were not detected. The identification of antimicrobial resistance genes in rainbow trout fry (weight 0.5 g) showed that genes for antimicrobial resistance could be spread during any stage of the fishes’ life, thereby facilitating transmission of resistance to humans and other animals. The investigation of antimicrobial resistance genes in phenotypically susceptible isolates revealed that it is insufficient to investigate only phenotypic resistance in antimicrobial resistance studies.en_US
dc.description.sponsorshipGıda Tarım Ve Hayvancılık Bakanlığı Tarımsal Araştırmalar ve Politikalar Genel Müdürlüğü (TAGEM/14/AR-GE/26)tr_TR
dc.description.sponsorshipBilimsel Araştırma Dairesi Başkanlığı (KUAP (V)-2014/7)tr_TR
dc.language.isoenen_US
dc.publisherIranian Fisheries Research Organizationen_US
dc.rightsinfo:eu-repo/semantics/closedAccessen_US
dc.subjectFisheriesen_US
dc.subjectLactococcus garvieaeen_US
dc.subjectAntimicrobial resistance genesen_US
dc.subjectGenotypingen_US
dc.subjectRAPD-PCRen_US
dc.subjectAntimicrobial resistanceen_US
dc.subjectAntibiotics-resistanceen_US
dc.subjectDrug-resistanceen_US
dc.subjectAntibacterial agentsen_US
dc.subjectFishen_US
dc.subjectStrainsen_US
dc.subjectPCRen_US
dc.subjectInfectionen_US
dc.subjectGenesen_US
dc.subjectOxytetracyclineen_US
dc.subjectSusceptibilityen_US
dc.titleEpidemiology, genotypic diversity, and antimicrobial resistance of Lactococcus garvieae in farmed rainbow trout (Oncorhynchus mykiss)en_US
dc.typeArticleen_US
dc.identifier.wos000508616300001tr_TR
dc.identifier.scopus2-s2.0-85078004420tr_TR
dc.relation.publicationcategoryMakale - Uluslararası Hakemli Dergitr_TR
dc.contributor.departmentUludağ Üniversitesi/Veteriner Fakültesi/Klinik Öncesi Bilimler Bölümü.tr_TR
dc.contributor.departmentUludağ Üniversitesi/Veteriner Fakültesi/Su Hayvanları Hastalıkları Anabilim Dalı.tr_TR
dc.contributor.departmentUludağ Üniversitesi/Veteriner Fakültesi/Farmakoloji ve Toksikoloji Anabilim Dalı.tr_TR
dc.contributor.orcid0000-0001-7707-2705tr_TR
dc.contributor.orcid0000-0001-9096-875Xtr_TR
dc.identifier.startpage1tr_TR
dc.identifier.endpage18tr_TR
dc.identifier.volume19tr_TR
dc.identifier.issue1tr_TR
dc.relation.journalIranian Journal of Fisheries Sciencesen_US
dc.contributor.buuauthorDuman, Muhammed-
dc.contributor.buuauthorBüyükekiz, Ayşe Gül-
dc.contributor.buuauthorCengiz, Murat-
dc.contributor.buuauthorŞahintürk, Pınar-
dc.contributor.buuauthorAltun, Soner-
dc.contributor.researcheridT-1697-2019tr_TR
dc.contributor.researcheridCGY-6379-2022tr_TR
dc.contributor.researcheridABE-5935-2020tr_TR
dc.contributor.researcheridDPN-8375-2022tr_TR
dc.contributor.researcheridAAG-8518-2021tr_TR
dc.relation.collaborationYurt içitr_TR
dc.subject.wosFisheriesen_US
dc.indexed.wosSCIEen_US
dc.indexed.scopusScopusen_US
dc.wos.quartileQ4en_US
dc.contributor.scopusid55568071100tr_TR
dc.contributor.scopusid16635026700tr_TR
dc.contributor.scopusid55567777200tr_TR
dc.contributor.scopusid55342852700tr_TR
dc.contributor.scopusid56269221600tr_TR
dc.subject.scopusLactococcus garvieae; Streptococcus iniae; Fishen_US
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